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Graph learning for genomic repeat detection

Graph neural networks and self-supervised learning, applied to a framework that uses graph embeddings to detect repeats in genomes.

When
Summer 2026
Role
Undergraduate Researcher
Lab
Segarra Lab, Graph Signal Processing (GSP) & Machine Learning Laboratory
Institution
Rice University
Topics
  • Graph neural networks
  • Self-supervised learning
  • Genomics
Methods
  • GCN
  • GraphSAGE
  • GAT
  • Graph embeddings

Researched graph neural networks (GCN, GraphSAGE, GAT) and self-supervised learning, developing a framework using graph embeddings and machine learning for genomic repeat detection.

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